Protein Molecular Weight Calculator Formula

Understand the math behind the protein molecular weight calculator. Each variable explained with a worked example.

Formulas Used

Estimated Molecular Weight

mw_da = residues * 110 + 18

Estimated Molecular Weight

mw_kda = (residues * 110 + 18) / 1000

Variables

VariableDescriptionDefault
residuesNumber of Amino Acid Residues300

How It Works

Protein Molecular Weight Estimation

The molecular weight of a protein can be estimated from the number of amino acid residues using the average residue weight.

Formula

MW = N × 110 + 18

where N is the number of residues and 110 Da is the average amino acid residue weight (after peptide bond formation removes water). The +18 accounts for the water molecule completing the N-terminus and C-terminus. The actual average residue weight is 111.1 Da for a typical protein composition.

Worked Example

A protein with 300 amino acid residues.

residues = 300
  1. 01MW = 300 × 110 + 18 = 33,018 Da
  2. 02MW = 33.0 kDa